Soanes, Darren; Ryder, Lauren S.; Islam, M. Tofazzal; J. Talbot, Nicholas (2017): Genome assemblies of Magnaporthe oryzae isolated from Bangladesh in 2016 and 2017. figshare.
Genomic DNA from nineteen isolates of Magnaporthe oryzae sampled from barley, wheat and torpedo grass in Bangladesh were sequenced using Illumina HiSeq 2500 producing 125 base paired-end reads. Reads were assembled ‘de novo’ using Spades.
Please click on isolate names to download genome assemblies.
| Magnaporthe oryzae isolate | location | Date of collection | Source of collection | Variety | ENA Accession* |
|---|---|---|---|---|---|
| BTBa-B1 | BSMRAU(campus) Gazipur | June, 2016 | Barley leaf | BARI Barley-5 | ERS1849824 (SAMEA104190806) |
| BTBa-B2 | BSMRAU(campus) Gazipur | June, 2016 | Barley leaf | BARI Barley-5 | ERS1849825 (SAMEA104190807) |
| BTGP-6(e) | Gangni, Meherpur | February, 2017 | Wheat spike | Prodip | ERS1849826 (SAMEA104190808) |
| BTGP-1(b) | Gangni, Meherpur | February, 2017 | Wheat spike | Prodip | ERS1849827 (SAMEA104190809) |
| BTGP-6(f) | Gangni, Meherpur | February, 2017 | Wheat spike | Prodip | ERS1849828 (SAMEA104190810) |
| BTGP-6(g) | Gangni, Meherpur | February, 2017 | Wheat spike | Prodip | ERS1849829 (SAMEA104190811) |
| BTGP-6(h) | Gangni, Meherpur | February, 2017 | Wheat spike | Prodip | ERS1849830 (SAMEA104190812) |
| BTJP-4(1) | Jhenaidah | March, 2016 | Wheat seed | Prodip | ERS1849831 (SAMEA104190813) |
| BTJP-4(3) | Jhenaidah | March, 2016 | Wheat seed | Prodip | ERS1849832 (SAMEA104190814) |
| BTJP-4(5) | Jhenaidah | March, 2016 | Wheat seed | Prodip | ERS1849833 (SAMEA104190815) |
| BTJP-4(6) | Jhenaidah | March, 2016 | Wheat seed | Prodip | ERS1849834 (SAMEA104190816) |
| BTJP-4(11) | Jhenaidah | March, 2016 | Wheat seed | Prodip | ERS1849835 (SAMEA104190817) |
| BTJP-4(12) | Jhenaidah | March, 2016 | Wheat seed | Prodip | ERS1849836 (SAMEA104190818) |
| BTJP-4(16) | Jhenaidah | March, 2016 | Wheat seed | Prodip | ERS1849837 (SAMEA104190819) |
| BTJP-4(18) | Jhenaidah | March, 2016 | Wheat seed | Prodip | ERS1849838 (SAMEA104190820) |
| BTMP-S-13(1) | Meherpur | March, 2016 | Wheat seed | Prodip | ERS1849839 (SAMEA104190821) |
| BTMP-S-13(2) | Meherpur | March, 2016 | Wheat seed | Prodip | ERS1849840 (SAMEA104190822) |
| BTTrp-5 | BSMRAU(campus) Gazipur | July, 2016 | Torpado weed leaf | Wild grass | ERS1849841 (SAMEA104190823) |
| BTTrp-6 | BSMRAU(campus) Gazipur | July, 2016 | Torpado weed leaf | Wild grass | ERS1849842 (SAMEA104190824) |
*Reads archived in European Nucleotide Archive, study accession PRJEB22035.
